Browse of TCMCG007C12015 protein

CDS

Accession Number	TCMCG007C12015
gbkey	CDS
Protein Id	XP_009126808.1
Location	complement(join(5778685..5779668,5779745..5779987,5780075..5780425,5780504..5780591,5780678..5780775,5780886..5781080,5781160..5781267,5781348..5781419,5781903..5782076))
Gene	LOC103851680
GeneID	103851680
Organism	Brassica rapa

Protein

Length	770aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_009128560.3
Definition	eukaryotic translation initiation factor [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	J
Description	translation initiation factor
KEGG_TC	-
KEGG_Module	M00428        [VIEW IN KEGG]
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko03012        [VIEW IN KEGG] ko03019        [VIEW IN KEGG]
KEGG_ko	ko:K03260        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03013        [VIEW IN KEGG] ko05416        [VIEW IN KEGG] map03013        [VIEW IN KEGG] map05416        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003729        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGCAGCAGGGAGATAAATCGGTTTTGAGCTTGAGACCTGGTGGCGGTAGAGGAAACAGAATCTTTGGTTCCTCATCCTCTTCTTCGTCCATCTCCTTTGGATCTCTTTCCTCTTCCGATCTACCTCTCCTTCGTCCTCATGGCGGTGCTCCTCCTTCCTCTTTCCCCTTCAAGGGTGGAGACTCGAGGTTCGATGGCCGTGAACGTGTGAAGTACACCCGTGAACAGCTTCTGGAACTTAAAGAGACCGCTCAACTCTCTGATGAAATTCTGAAAGTCAAACGGGAAACTGAACTAGAACTGTTTGGTGAGGAACAGACTTGGGCACGTGGAGAAACTGTCGTAAGCAATGTGGTTCCGGTTCAATCCGCAAGTCGCTTCTCTGAGCCAGACACTCGCAATTGGCGCAGCCGTTCTGCTGCTCAACCACCACCCTCTGGGGAAGAAAGGTCGTGGGAGAATCTCCGTGAAGCTAGAGATTCCAGGTATGTTGAAGCAAACCAATACAATCGTCAAGGCCAACCTAGGGGGCAAGCATCCAACCAAGGGGGTGGACCAGCTCCTGTCCTCGTCAAAGCTGAAGTACCTTGGTCAGCTAGAAGAGGAAACCTTTCTGAAAATGACCGTGTCCTGAAGACTGTCAAAGGGATACTGAACAAGCTTACCCCTGAAAAGTATGATCTTCTCAAGGGCCAACTCATTGACGCTGGCATCACATCTGCTGATATCCTAAAGGGTGTGATAACTCTTATCTTTGACAAAGCTGTCCTTGAGCCAACGTTCTGCCCAATGTACGCTGAGTTGTGCTCTGACATCAACGACAAGCTACCCACCTTCCCACCTGAAGAGCCTGGGGGTAAAGAGATCACATTCAAGAGGGTTCTGCTGAACATCTGCCAAGAGGCCTTTGAAGGCGCTTCCAATCTGAGGGAGGAGCTTAAACAGATGAGTGCTCCAGATCAGGAGGCTGAGCGTAGCGACAAAGAGAAGTTGCTGAAGCTCAAGACCCTAGGAAACATTCGTCTGATTGGTGAGCTTCTCAAGCAGAAGATGGTTCCAGAAAAGATTGTTCATCACATCGTTCAGGAGCTTCTGGGGGCTGATGAGAAAGCGTGTCCAGCAGAGGAGAATGTTGAAGCTATTTGCCATTTCTTCAAAACCATTGGGAAACAGCTTGATGGAAACATGAAGTCAAAACGTATCAATGATGCATACTTCAAACGCCTGCAGGATCTGTCAAAGAATCCTCATCTGGAACTGCGTCTGAGATTCATGGTTCAGAATATCATCGATCTGCGCTCTAATGGATGGGTTCCAAGGCGTGAAGAGATGAAAGCAAAGACTATAACAGAAATCCATTCTGACGCTGAGAAGAATATGGGTCTCCGACCAGGCGCCACCGCAAACATGAGAAAGGGCATGGCTTCTAGTAGCGGGCCTCTGAGTCCTGGCCCTATCTACCCTGGAGGACGACCTGGTGCAGGTGGCTTGATGCCTGGTATGCCTGGGACGCGAAGGATGCCAGGAGCGCCTGTGGGGGACAATGATAACTGGGAGGTTCCCAGGACAAGGTCAATGTCTAGACGCGACGGGCCTGGACCTCTGCATTCTCCAGCAATGGGCAAGTCCACCTCAATGAACACGAGGCTCTTGCCTCAAGGAAGCAGCGGGTTCATGAGTGGTAAGACAAGCGCCCTGTTACAGGGCAGCAGCTCACGCCCAGCAGAACAACCGGTTCAGCGAGCTGCACCTGTGGCTGTACCGGCTCCGGTAGAGAAACCACAGGCTAGTGCTGCTCCCAAGCTGAGCGAGGAAGTTCTCAAGAGCAAAACAAAGTCGCTTCTTGAGGAGTATTTCAATGTCCGACTTCTTGATGAAGCTATGCAGTGTTTGGTGGACCTTGCGTCGCCTTCATACCACGCAGAGTTTGTGAATGAAGCAATTACTCTAGCCCTTGAGAAAAGCCCACCTGTTGTTGAGCCCATCGCTAGTCTCTTGGTGTATCTGCTATCCAAGAAGGTGGTCACACCCAAGGATCTTGAAACTGGGTGCTTGATGTTCGGTGCTATGCTGGACGACGTTGGAATCGATCTCCCCAAGGCACCAAACAACTTTGGTGAGATTGTAGGGAAGCTGATTGTTACTGGTGGTGTGGATTTTAAATTTGTTAGAGAGGTCCTTGGAAAGATGGAGGATGATAGGTTCCAGAAGGCGGTGATTGATGCAGCTGTGCGCATTGTGGAATCTAGCGAGCAGGGGAAGTCGCTGTTGGCCTCACAGGCTGCAGACGTCGAGGCTTGTCGGAATCTGTAA

Protein:   MQQGDKSVLSLRPGGGRGNRIFGSSSSSSSISFGSLSSSDLPLLRPHGGAPPSSFPFKGGDSRFDGRERVKYTREQLLELKETAQLSDEILKVKRETELELFGEEQTWARGETVVSNVVPVQSASRFSEPDTRNWRSRSAAQPPPSGEERSWENLREARDSRYVEANQYNRQGQPRGQASNQGGGPAPVLVKAEVPWSARRGNLSENDRVLKTVKGILNKLTPEKYDLLKGQLIDAGITSADILKGVITLIFDKAVLEPTFCPMYAELCSDINDKLPTFPPEEPGGKEITFKRVLLNICQEAFEGASNLREELKQMSAPDQEAERSDKEKLLKLKTLGNIRLIGELLKQKMVPEKIVHHIVQELLGADEKACPAEENVEAICHFFKTIGKQLDGNMKSKRINDAYFKRLQDLSKNPHLELRLRFMVQNIIDLRSNGWVPRREEMKAKTITEIHSDAEKNMGLRPGATANMRKGMASSSGPLSPGPIYPGGRPGAGGLMPGMPGTRRMPGAPVGDNDNWEVPRTRSMSRRDGPGPLHSPAMGKSTSMNTRLLPQGSSGFMSGKTSALLQGSSSRPAEQPVQRAAPVAVPAPVEKPQASAAPKLSEEVLKSKTKSLLEEYFNVRLLDEAMQCLVDLASPSYHAEFVNEAITLALEKSPPVVEPIASLLVYLLSKKVVTPKDLETGCLMFGAMLDDVGIDLPKAPNNFGEIVGKLIVTGGVDFKFVREVLGKMEDDRFQKAVIDAAVRIVESSEQGKSLLASQAADVEACRNL